Complete Academic CV

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Education

Ph.D. in Quantitative Biology
University of Lausanne, Switzerland, 2020 – 2025

M.S. in Biology
Indian Institute of Science, Bangalore, India, 2019 – 2020

B.S. (Research) in Biology
Indian Institute of Science, Bangalore, India, 2015 – 2019


Research Experience

PhD Candidate – University of Lausanne
Aug 2020 – Present
Ecology and evolution of the honeybee gut microbiome

Master’s Thesis Research – Indian Institute of Science
May 2019 – May 2020
Human gut microbiome analysis using Nanopore-based metagenomic sequencing

Undergraduate Thesis Research – Indian Institute of Science
Aug 2018 – Jul 2019
Metaproteomic analysis of gut microbiomes from fecal samples

Summer Research Project – inStem, Bengaluru
May 2017 – Jul 2017
Cloning and expression of native cockroach milk protein in yeast

iGEM Undergraduate Research – Indian Institute of Science
May 2016 – Oct 2016
Project Cellfiefuge: Auto-inducing and auto-aggregating bacteria


Publications

Mazel, F., Prasad, A., & Engel, P. (2025). Host specificity of gut microbiota associated with social bees. Microbiology and Molecular Biology Reviews, e00080-23. DOI

Somerville, V., Prasad, A., et al. (2025). Strain-level and phenotypic stability contrasts with plasmid and phage variability in water kefir. bioRxiv, In Review

Prasad, A., Pallujam A. D., et al. (2024). Symbiont loss and gain, rather than co-diversification, shapes honeybee gut microbiota. bioRxiv, In Review

Baud, G. L., Prasad, A., et al. (2023). Turnover of strain-level diversity modulates functional traits in the honeybee gut. Genome Biology, DOI

Sarton-Lohéac, G., …, Prasad, A., et al. (2023). Deep divergence of gut symbionts in stingless bees. mBio, DOI

Beal, J., Dwijayanti, A., … with the iGEM Interlab Study Contributors (incl. Prasad, A.) (2018). Quantification of bacterial fluorescence using calibrants. PLOS One, DOI


Fellowships and Awards

FBM PhD Fellowship, University of Lausanne
2020 – 2023

Mathilde Agassiz Scholarship
2020 – 2021 — CHF 70,000 award

KVPY Fellowship
2015 – 2020 — All-India Rank: 335

iGEM Bronze Medal
2016 — Co-founded IISc’s first iGEM team; secured 3 research and travel grants


Invited Talks

The Local Pangenome
Oct 2023 – Alicante, Spain
Talk: Variation and specialization of gut microbial community structure and function

Academic Seminar Series
Apr 2023 – Monash University Malaysia
Talk: Evolutionary and functional insight into honeybee gut microbiota


Conferences

Microbiome Virtual International Forum
Nov 2024 – Online
Best Selected Talk: Evolution and Functional Potential of Honeybee Gut Microbiota

Gordon Research Conference – Animal Microbe Symbiosis
Jun 2023 – Lucca, Italy
Poster presentation

CSHL Meeting: Microbiome
Oct 2023 – Cold Spring Harbor, USA
Poster presentation

SymbNET PhD Summer School
Jul 2022 – Instituto Gulbenkian de Ciência, Portugal
Poster presentation


Teaching

Teaching Assistant – SAGE (Sequence A Genome)
2021 – 2024
Masters-level bioinformatics course


Professional Activities


Extracurricular Activities

Open Science Meeting
Nov 2023 – NCCR Microbiomes, Switzerland

Decolonizing North–South Research Collaboration Workshop
Aug 2022 – University of Bern
Contributed to discussions on equitable partnerships in global research

iGEM India BioSummit
Jul 2020 – Moderator for panel on Health & Data Privacy

UN Convention on Biological Diversity
Nov 2018 – Delegate, Sharm El-Sheikh, Egypt
Advocated for youth inclusion in science diplomacy and gene-tech policy